Browse Skills

Provides workflows and scripts for deep learning-based single-cell analysis with scvi-tools, including batch correction, multi-modal integration, and label transfer. Ideal when users mention scVI, scANVI, totalVI, or related models.

A conversational framework that helps scientists systematically choose research problems, troubleshoot projects, and make strategic decisions using decision trees and risk assessment.

Run nf-core bioinformatics pipelines for RNA-seq, WGS/WES, or ATAC-seq analysis on local or public sequencing data. Handles environment setup, sample sheet generation, and pipeline execution.

Converts laboratory instrument files (PDF, CSV, Excel) to Allotrope Simple Model (ASM) JSON or flattened CSV. Use for standardizing data for LIMS, data lakes, and analysis, with auto-detection of instrument types and exportable Python parsers.

Generates single-file HTML horizontal scroll presentations with WebGL backgrounds, chapter covers, data posters, and image grids in either electronic magazine or Swiss International style. Use when creating web-based slide decks for talks, launches, or sharing.

Reconcile accounts by comparing GL balances to subledgers, bank statements, or third-party data. Use when performing bank reconciliations, GL-to-subledger recs, intercompany reconciliations, or identifying and categorizing reconciling items.

Document control system management for medical device QMS. Covers document numbering, version control, change management, and 21 CFR Part 11 compliance.

Create EmDash CMS plugins with hooks, storage, settings, admin UI, API routes, and Portable Text block types. Use this when building, scaffolding, or implementing EmDash plugins and features like custom blocks or admin pages.

Build and customize EmDash CMS sites on Astro. Use for creating pages, defining collections, writing seed files, querying content, rendering Portable Text, and configuring deployment.

Use the EmDash CLI to manage EmDash CMS instances from the command line, including content CRUD, schema management, media uploads, and type generation. Ideal for scripting, automation, and CI/CD pipelines.

Create EmDash CMS plugins with hooks, storage, settings, admin UI, API routes, and Portable Text block types. Use this skill when asked to build, scaffold, or implement an EmDash plugin, or when creating plugin features like custom block types, admin pages, or content hooks.

Build and customize EmDash CMS sites on Astro. Use when creating pages, defining collections, writing seed files, querying content, rendering Portable Text, setting up menus/taxonomies/widgets, configuring deployment, or any task involving an EmDash-powered Astro site. Assumes basic Astro knowledge but provides all EmDash-specific patterns.