Documentation
README
BindCraft Binder Design
Prerequisites
| Requirement | Minimum | Recommended |
|---|---|---|
| Python | 3.9+ | 3.10 |
| CUDA | 11.7+ | 12.0+ |
| GPU VRAM | 32GB | 48GB (L40S) |
| RAM | 32GB | 64GB |
How to run
First time? See Installation Guide to set up Modal and biomodals.
Option 1: Modal (recommended)
cd biomodals
modal run modal_bindcraft.py \
--target-pdb target.pdb \
--target-chain A \
--binder-lengths 70-100 \
--hotspots "A45,A67,A89" \
--num-designs 50
GPU: L40S (48GB) | Timeout: 3600s default
This is the opening of the README. Read the full README on GitHub.